MolNFT v1 · #166255 · protein + DNA
Hhai endonuclease in complex with DNA at 1 ångström resolution
6UKF: “Hhai endonuclease in complex with DNA at 1 ångström resolution”. X-ray diffraction, 2 ligands (CA, PO4). MolNFT v1 #166255 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UKF
- Type
- protein + DNA
- Length
- 284 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- I3DBY6
- Ligands
- CA, PO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | — | protein | 258 | — | I3DBY6 |
| A | — | dna | 13 | — | — |
| B | — | dna | 13 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · chains X
- PO4 · Phosphate ion · ion · chains X
- EDO · 1,2-ethanediol · additive · 16 copies · chains X, B, A
- ACT · Acetate ion · additive · chains X
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UKF · HhaI endonuclease in Complex with DNA at 1 Angstrom Resolution · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I3DBY6
- Elsewhere: RCSB PDB 6UKF · PDBe 6UKF · UniProt I3DBY6
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