MolNFT v1 · #166203 · protein
Artificial iron proteins: modelling the active sites in non-heme dioxygenases
6UIU · Streptavidin: “Artificial iron proteins: modelling the active sites in non-heme dioxygenases”. X-ray diffraction, 1 ligand (QG7), 1 pocket (best druggability 0.47). MolNFT v1 #166203 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6UIU
- Type
- protein
- Length
- 124 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Streptavidin
- UniProt
- P22629
- Ligands
- QG7
- Pockets
- 1 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 54% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Streptavidin | protein | 124 | 8% helix, 54% strand | P22629 |
Ligands and binding sites
- QG7 · N-(2-{bis[(pyridin-2-yl)methyl]amino}ethyl)-5-[(3as,4s, 6AR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 93 | 0.47 | 0.80 | 18 | QG7 |
Compared structures
- 6UIU · Artificial Iron Proteins: Modelling the Active Sites in Non-Heme Dioxygenases · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22629
- Elsewhere: RCSB PDB 6UIU · PDBe 6UIU · UniProt P22629
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.