MolNFT v1 · #165875 · protein

Structure of rnd efflux system, outer membrane lipoprotein, nodt family from burkholderia mallei atcc 23344

6U94: “Structure of rnd efflux system, outer membrane lipoprotein, nodt family from burkholderia mallei atcc 23344”. X-ray diffraction, 3 pockets (best druggability 0.61). MolNFT v1 #165875 on GenesisL1: 3D structure, binding sites and…

PDB: 6U94
Type: protein
Length: 385 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Rnd efflux system, outer membrane lipoprotein, nodt family
UniProt: A0A0H2WCA9
Pockets: 3 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 70% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rnd efflux system, outer membrane lipoprotein, nodt family	protein	385	70% helix, 2% strand	A0A0H2WCA9

Ligands and binding sites

GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	345	0.61	0.78	31	GOL
2	113	0.42	0.77	18	empty
3	63	0.36	0.78	15	GOL

Compared structures

6U94 · Structure of RND efflux system, outer membrane lipoprotein, NodT family from Burkholderia… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0H2WCA9
Elsewhere: RCSB PDB 6U94 · PDBe 6U94 · UniProt A0A0H2WCA9

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.