MolNFT v1 · #165835 · RNA
RNA hairpin structure containing one tna nucleotide as template
6U7Y · RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*(TG)…: “RNA hairpin structure containing one tna nucleotide as template”. X-ray diffraction, 1 ligand (C). MolNFT v1 #165835 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6U7Y
- Type
- RNA
- Length
- 34 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*(TG) P*CP*CP*GP*AP*AP*AP*GP*G)-3'); RNA…
- Ligands
- C
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*(TG) P*CP*CP*GP*AP*AP*AP*GP*G)-3') | rna | 22 | — | — |
| B | RNA (5'-R(*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3') | rna | 12 | — | — |
Ligands and binding sites
- C · Cytidine-5'-monophosphate · ligand · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 703 Ų buried · 65 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 6U7Y · RNA hairpin structure containing one TNA nucleotide as template · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6U7Y · PDBe 6U7Y
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