MolNFT v1 · #165696 · protein

DQ2-P.FLUOR-ALPHA1A

6U3M: “DQ2-P.FLUOR-ALPHA1A”. X-ray diffraction, 2 ligands (NAG, PO4). MolNFT v1 #165696 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6U3M
Type: protein
Length: 746 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P01909, O19712
Ligands: NAG, PO4

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
C, A	—	protein	181	—	P01909
D, B	—	protein	181	—	O19712
E, F	—	protein	11	—	—

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains C, D, A
PO4 · Phosphate ion · ion · chains D
GOL · Glycerol · additive · 4 copies · chains C, D, F, A, B, E

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6U3M · DQ2-P.fluor-alpha1a · the same entry in another collection · chain F against F, TM-score 1.00
P01909 · AlphaFold monomer V2.0 prediction for HLA class II histocompatibility antigen, dq alpha 1… · a predicted model of the same protein · chain C against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P01909
Every structure of UniProt O19712
Elsewhere: RCSB PDB 6U3M · PDBe 6U3M · UniProt P01909 · UniProt O19712

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.