MolNFT v1 · #16550 · protein
Complex of enzyme iiaglc and iibglc phosphocarrier protein hpr from escherichia COLI NMR, restrained regularized mean structure
1O2F · Pts system, glucose-specific iia component: “Complex of enzyme iiaglc and iibglc phosphocarrier protein hpr from escherichia COLI NMR, restrained…”. Solution nmr, 1 ligand (PO3), 1 pocket (best druggability 0.36). MolNFT v1 #16550…
- PDB
- 1O2F
- Type
- protein
- Length
- 227 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pts system, glucose-specific iia component; Pts system, glucose-specific iibc component
- EC
- 2.7.1.69
- UniProt
- P69783, P69786
- Ligands
- PO3
- Pockets
- 1 · best druggability 0.36
Structure
solution nmr · 2 distinct chains · 24% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pts system, glucose-specific iia component (EC 2.7.1.69) | protein | 150 | 14% helix, 41% strand | P69783 |
| B | Pts system, glucose-specific iibc component (EC 2.7.1.69) | protein | 77 | 44% helix, 27% strand | P69786 |
Ligands and binding sites
- PO3 · Phosphite ion · ion · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 66 | 0.36 | 0.78 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 608 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 1O2F · Complex of enzyme iiaglc and iibglc phosphocarrier protein hpr from escherichia COLI NMR… · the same entry in another collection · chain B against B, TM-score 1.00
- P69783 · AlphaFold monomer V2.0 prediction for pts system glucose-specific eiia component (P69783) · a predicted model of the same protein · chain A against A, TM-score 0.99
- P69786 · AlphaFold monomer V2.0 prediction for pts system glucose-specific eiicb component (P69786) · a predicted model of the same protein · chain B against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69783
- Every structure of UniProt P69786
- Elsewhere: RCSB PDB 1O2F · PDBe 1O2F · UniProt P69783 · UniProt P69786
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