MolNFT v1 · #165040 · protein
Cedar virus attachment glycoprotein (G) in complex with human ephrin- B1
6THG: “Cedar virus attachment glycoprotein (G) in complex with human ephrin- B1”. X-ray diffraction, 2 ligands (NAG, BMA). MolNFT v1 #165040 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6THG
- Type
- protein
- Length
- 2,763 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A185KRV2, P98172
- Ligands
- NAG, BMA
Structure
x-ray diffraction · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 419 | — | A0A185KRV2 |
| D, C, J | — | protein | 136 | — | P98172 |
| A | — | protein | 418 | — | A0A185KRV2 |
| E, G | — | protein | 415 | — | A0A185KRV2 |
| I | — | protein | 417 | — | A0A185KRV2 |
| F | — | protein | 137 | — | P98172 |
| H | — | protein | 134 | — | P98172 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 43 copies · chains B, C, A, D, E, H, I, G, F, J
- BMA · beta-D-mannopyranose · sugar · 6 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A185KRV2
- Every structure of UniProt P98172
- Elsewhere: RCSB PDB 6THG · PDBe 6THG · UniProt A0A185KRV2 · UniProt P98172
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