MolNFT v1 · #165038 · protein

Crystal structure of core domain of four-domain heme-cupredoxin-cu nitrite reductase from bradyrhizobium sp. ors 375

6THE · Copper-containing nitrite reductase: “Crystal structure of core domain of four-domain heme-cupredoxin-cu nitrite reductase from bradyrhizobium sp.…”. X-ray diffraction, 7 ligands (9JE, ER3, YB). MolNFT v1 #165038 on GenesisL1: 3D…

PDB: 6THE
Type: protein
Length: 299 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Copper-containing nitrite reductase
EC: 1.7.2.1
UniProt: H0SHH5
Ligands: 9JE, ER3, YB, CU, YT3, TB, CL

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Copper-containing nitrite reductase (EC 1.7.2.1)	protein	299	7% helix, 46% strand	H0SHH5

Ligands and binding sites

9JE · pentane-1,5-diol · ligand · 7 copies · chains A
ER3 · Erbium (III) ion · metal · 4 copies · chains A
YB · Ytterbium (III) ion · metal · 3 copies · chains A
CU · Copper (II) ion · metal · 2 copies · chains A
YT3 · Yttrium (III) ion · metal · 2 copies · chains A
TB · Terbium(iii) ion · metal · chains A
CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6THE · Crystal structure of core domain of four-domain heme-cupredoxin-Cu nitrite reductase from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt H0SHH5
Elsewhere: RCSB PDB 6THE · PDBe 6THE · UniProt H0SHH5

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