MolNFT v1 · #164715 · protein
Human endoplasmic reticulum aminopeptidase 1 (ERAP1) in complex with (4AR,5S,6R,8S,8AR)-5-(2-(furan-3-YL)ETHYL)-8-hydroxy-5,6,8A- trimethyl-3,4,4A,5,6,7,8,8A-octahydronaphthalene-1-carboxylic acid
6T6R: “Human endoplasmic reticulum aminopeptidase 1 (ERAP1) in complex with…”. X-ray diffraction, 3 ligands (MLT, MNZ, ZN). MolNFT v1 #164715 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6T6R
- Type
- protein
- Length
- 856 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9NZ08
- Ligands
- MLT, MNZ, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 856 | — | Q9NZ08 |
Ligands and binding sites
- MLT · D-malate · ligand · 2 copies · chains A
- MNZ · (4~{A}~{R},5~{S},6~{R},8~{S},8~{A}~{R})-5-[2-(furan-3-yl)ethyl]-5,6,8~{A}-trimethyl-8-oxidanyl-3,4,4~{A},6, 7,8-hexahydronaphthalene-1-carboxylic acid · ligand · chains A
- ZN · Zinc ion · metal · chains A
- EDO · 1,2-ethanediol · additive · 18 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6T6R · Human endoplasmic reticulum aminopeptidase 1 (ERAP1) in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9NZ08 · AlphaFold monomer V2.0 prediction for endoplasmic reticulum aminopeptidase 1 (Q9NZ08) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NZ08
- Elsewhere: RCSB PDB 6T6R · PDBe 6T6R · UniProt Q9NZ08
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