MolNFT v1 · #164556 · protein
Crystal structure of MLLT1 (enl) yeats domain in complexed with benzimidazole-amide derivative 4
6T1M · Protein enl: “Crystal structure of MLLT1 (enl) yeats domain in complexed with benzimidazole-amide derivative 4”. X-ray diffraction, 1 ligand (M8K). MolNFT v1 #164556 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6T1M
- Type
- protein
- Length
- 142 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein enl
- UniProt
- Q03111
- Ligands
- M8K
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 51% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein enl | protein | 142 | 8% helix, 51% strand | Q03111 |
Ligands and binding sites
- M8K · 4-cyano-~{N}-[2-(piperidin-1-ylmethyl)-1~{H}-benzimidazol-5-yl]benzamide · ligand · chains A
- EDO · 1,2-ethanediol · additive · 7 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6T1M · Crystal structure of MLLT1 (ENL) YEATS domain in complexed with benzimidazole-amide… · the same entry in another collection · chain A against A, TM-score 1.00
- Q03111 · AlphaFold monomer V2.0 prediction for protein enl (Q03111) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q03111
- Elsewhere: RCSB PDB 6T1M · PDBe 6T1M · UniProt Q03111
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