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MolNFT v1 · #16433 · protein

4TH lim domain of pinch protein

1NYP: “4TH lim domain of pinch protein”. Solution nmr, 1 ligand (ZN). MolNFT v1 #16433 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1NYP
Type
protein
Length
66 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Pinch protein
UniProt
P48059
Ligands
ZN

Structure

solution nmr · 1 distinct chain · 11% helix, 26% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APinch proteinprotein6611% helix, 26% strandP48059

Ligands and binding sites

  • ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 1NYP · 4th LIM domain of PINCH protein · the same entry in another collection · chain A against A, TM-score 1.00
  • P48059 · AlphaFold monomer V2.0 prediction for lim and senescent cell antigen- like-containing… · a predicted model of the same protein · chain A against A, TM-score 0.79

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