MolNFT v1 · #163994 · protein

Precursor structure of the self-processing module of iron-regulated frpc of N. meningitidis with calcium ions

6SJX · Iron-regulated protein frpc: “Precursor structure of the self-processing module of iron-regulated frpc of N. meningitidis with calcium ions”. Solution nmr, 1 ligand (CA), 1 pocket (best druggability 0.75). MolNFT v1 #163994 on…

PDB: 6SJX
Type: protein
Length: 182 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Iron-regulated protein frpc
UniProt: P55127
Ligands: CA
Pockets: 1 · best druggability 0.75

Structure

solution nmr · 1 distinct chain · 10% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Iron-regulated protein frpc	protein	182	10% helix, 35% strand	P55127

Ligands and binding sites

CA · Calcium ion · metal · 5 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	202	0.75	0.90	38	empty

Compared structures

6SJX · Precursor structure of the self-processing module of iron-regulated FrpC of N.… · the same entry in another collection · chain A against A, TM-score 1.00
P55127 · AlphaFold monomer V2.0 prediction for iron-regulated protein frpc (P55127) · a predicted model of the same protein · chain A against A, TM-score 0.86

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P55127
Elsewhere: RCSB PDB 6SJX · PDBe 6SJX · UniProt P55127

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