MolNFT v1 · #163606 · protein
Structure of D80A-fructofuranosidase from xanthophyllomyces dendrorhous complexed with tris-buffer molecule and hydroquinone
6S82: “Structure of D80A-fructofuranosidase from xanthophyllomyces dendrorhous complexed with tris-buffer molecule…”. X-ray diffraction, 4 ligands (PLQ, NAG, MAN). MolNFT v1 #163606 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6S82
- Type
- protein
- Length
- 1,248 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- J7HDY4
- Ligands
- PLQ, NAG, MAN, BMA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 624 | — | J7HDY4 |
Ligands and binding sites
- PLQ · 1,4-benzoquinone · ligand · 16 copies · chains A, B
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 37 copies · chains A, B
- MAN · alpha-D-mannopyranose · sugar · 21 copies · chains A, B
- BMA · beta-D-mannopyranose · sugar · 4 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6S82 · Structure Of D80A-Fructofuranosidase From Xanthophyllomyces Dendrorhous Complexed With… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J7HDY4
- Elsewhere: RCSB PDB 6S82 · PDBe 6S82 · UniProt J7HDY4
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