MolNFT v1 · #163585 · protein
Cfucosylated linker peptide SBL1 bound to fucose binding lectin lecb (pa-iil) from pseudomonas aeruginosa at 1.84 ångström resolution
6S7G: “Cfucosylated linker peptide SBL1 bound to fucose binding lectin lecb (pa-iil) from pseudomonas aeruginosa at…”. X-ray diffraction, 3 ligands (ZDC, CA, NH2). MolNFT v1 #163585 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6S7G
- Type
- protein
- Length
- 469 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A069Q9V4
- Ligands
- ZDC, CA, NH2
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 114 | — | A0A069Q9V4 |
| F, G | — | protein | 5 | — | — |
| H | — | protein | 2 | — | — |
| E | — | protein | 1 | — | — |
Ligands and binding sites
- ZDC · 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid · sugar · 4 copies · chains B, F, D, A, C, G, H, E
- CA · Calcium ion · metal · 8 copies · chains A, C, B, D
- NH2 · Amino group · ion · 2 copies · chains F, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6S7G · Cfucosylated linker peptide SBL1 bound to Fucose binding Lectin LecB (PA-IIL) from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A069Q9V4
- Elsewhere: RCSB PDB 6S7G · PDBe 6S7G · UniProt A0A069Q9V4
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.