MolNFT v1 · #163583 · protein

Plant cysteine oxidase PCO4 from arabidopsis thaliana (using peg 3350 and naf as precipitants)

6S7E · Plant cysteine oxidase 4: “Plant cysteine oxidase PCO4 from arabidopsis thaliana (using peg 3350 and naf as precipitants)”. X-ray diffraction, 1 ligand (FE), 3 pockets (best druggability 0.52). MolNFT v1 #163583 on GenesisL1: 3D…

PDB: 6S7E
Type: protein
Length: 222 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Plant cysteine oxidase 4
EC: 1.13.11.20
UniProt: Q9SJI9
Ligands: FE
Pockets: 3 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 39% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Plant cysteine oxidase 4 (EC 1.13.11.20)	protein	222	15% helix, 39% strand	Q9SJI9

Ligands and binding sites

FE · Fe (III) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	155	0.52	0.79	26	FE
2	58	0.33	0.77	20	empty
3	72	0.30	0.73	20	empty

Compared structures

6S7E · Plant Cysteine Oxidase PCO4 from Arabidopsis thaliana (using PEG 3350 and NaF as… · the same entry in another collection · chain A against A, TM-score 1.00
Q9SJI9 · AlphaFold monomer V2.0 prediction for plant cysteine oxidase 4 (Q9SJI9) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9SJI9
Elsewhere: RCSB PDB 6S7E · PDBe 6S7E · UniProt Q9SJI9

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