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Plant cysteine oxidase PCO4 from arabidopsis thaliana (using peg 3350 and naf as precipitants)

Analyse Plant cysteine oxidase PCO4 from arabidopsis thaliana (using peg 3350 and naf… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6S7E
Type: protein
Length: 222 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Plant cysteine oxidase 4
EC: 1.13.11.20
UniProt: Q9SJI9
Ligands: FE
Pockets: 3 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 39% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Plant cysteine oxidase 4 (EC 1.13.11.20)	protein	222	15% helix, 39% strand	Q9SJI9

Ligands and binding sites

FE · Fe (III) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	155	0.52	0.79	26	FE
2	58	0.33	0.77	20	empty
3	72	0.30	0.73	20	empty

Compared structures

6S7E · Plant Cysteine Oxidase PCO4 from Arabidopsis thaliana (using PEG 3350 and NaF as… · the same entry in another collection · chain A against A, TM-score 1.00
Q9SJI9 · AlphaFold monomer V2.0 prediction for plant cysteine oxidase 4 (Q9SJI9) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9SJI9
Elsewhere: RCSB PDB 6S7E · PDBe 6S7E · UniProt Q9SJI9

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