MolNFT v1 · #163374 · protein + DNA
T. thermophilus ruvc in complex with holliday junction substrate
6S16: “T. thermophilus ruvc in complex with holliday junction substrate”. X-ray diffraction, 2 ligands (NA, CL). MolNFT v1 #163374 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6S16
- Type
- protein + DNA
- Length
- 380 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5SJC4
- Ligands
- NA, CL
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 158 | — | Q5SJC4 |
| B | — | protein | 165 | — | Q5SJC4 |
| C | — | dna | 33 | — | — |
| D | — | dna | 12 | — | — |
| F | — | dna | 12 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6S16 · T. thermophilus RuvC in complex with Holliday junction substrate · the same entry in another collection · chain B against B, TM-score 1.00
- Q5SJC4 · AlphaFold monomer V2.0 prediction for crossover junction endodeoxyribonuclease ruvc… · a predicted model of the same protein · chain B against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SJC4
- Elsewhere: RCSB PDB 6S16 · PDBe 6S16 · UniProt Q5SJC4
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