MolNFT v1 · #163287 · protein

Structure of conglutinin carbohydrate recognition domain with ethylene glycol bound

6RYJ: “Structure of conglutinin carbohydrate recognition domain with ethylene glycol bound”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #163287 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6RYJ
Type: protein
Length: 122 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Conglutinin
UniProt: P23805
Ligands: CA

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Conglutinin	protein	122	20% helix, 25% strand	P23805

Ligands and binding sites

CA · Calcium ion · metal · 2 copies · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

6RYJ · structure of conglutinin carbohydrate recognition domain with ethylene glycol bound · the same entry in another collection · chain A against A, TM-score 1.00
P23805 · AlphaFold monomer V2.0 prediction for conglutinin (P23805) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P23805
Elsewhere: RCSB PDB 6RYJ · PDBe 6RYJ · UniProt P23805

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.