MolNFT v1 · #163166 · protein
Crystal structure of GFP-lama-G97 - a GFP enhancer nanobody with cpdhfr insertion and tmp and NADPH
6RUM: “Crystal structure of GFP-lama-G97 - a GFP enhancer nanobody with cpdhfr insertion and tmp and NADPH”. X-ray diffraction, 3 ligands (TOP, NDP, CL). MolNFT v1 #163166 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RUM
- Type
- protein
- Length
- 276 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0ABQ4
- Ligands
- TOP, NDP, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 276 | — | P0ABQ4 |
Ligands and binding sites
- TOP · Trimethoprim · ligand · chains A
- NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate · ligand · chains A
- CL · Chloride ion · ion · 3 copies · chains A
- PG4 · Tetraethylene glycol · additive · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6RUM · Crystal structure of GFP-LAMA-G97 - a GFP enhancer nanobody with cpDHFR insertion and TMP… · the same entry in another collection · chain A against A, TM-score 1.00
- P0ABQ4 · AlphaFold monomer V2.0 prediction for dihydrofolate reductase (P0ABQ4) · a predicted model of the same protein · chain A against A, TM-score 0.49
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0ABQ4
- Elsewhere: RCSB PDB 6RUM · PDBe 6RUM · UniProt P0ABQ4
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