MolNFT v1 · #163164 · protein
Cu-substituted alpha-keggin bound to proteinase K solved by mr
6RUK: “Cu-substituted alpha-keggin bound to proteinase K solved by mr”. X-ray diffraction, 2 ligands (XCU, SO4), 1 pocket (best druggability 0.36). MolNFT v1 #163164 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RUK
- Type
- protein
- Length
- 278 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Proteinase K
- EC
- 3.4.21.64
- UniProt
- P06873
- Ligands
- XCU, SO4
- Pockets
- 1 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proteinase K (EC 3.4.21.64) | protein | 278 | 27% helix, 24% strand | P06873 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 86 | 0.36 | 0.76 | 30 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6RUK · Cu-substituted alpha-Keggin bound to Proteinase K solved by MR · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06873
- Elsewhere: RCSB PDB 6RUK · PDBe 6RUK · UniProt P06873
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