MolNFT v1 · #162803 · protein
Crystal structure of a fungal catalase at 2.3 ångströms
6RJN: “Crystal structure of a fungal catalase at 2.3 ångströms”. X-ray diffraction, 6 ligands (HEM, NDP, K). MolNFT v1 #162803 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RJN
- Type
- protein
- Length
- 2,008 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- C1PHG1
- Ligands
- HEM, NDP, K, NA, CL, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 502 | — | C1PHG1 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 4 copies · chains A, D, B, C
- NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate · ligand · 4 copies · chains A, B, C, D
- K · Potassium ion · metal · 7 copies · chains A, B, C, D
- NA · Sodium ion · metal · 4 copies · chains A, B, C, D
- CL · Chloride ion · ion · 5 copies · chains A, C, B, D
- SO4 · Sulfate ion · ion · 2 copies · chains A
- GOL · Glycerol · additive · 17 copies · chains A, B, D, C
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6RJN · Crystal structure of a Fungal Catalase at 2.3 Angstroms · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C1PHG1
- Elsewhere: RCSB PDB 6RJN · PDBe 6RJN · UniProt C1PHG1
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