MolNFT v1 · #162743 · protein
Crystal structure of human CD11B I-domain (CD11B-I) in complex with staphylococcus aureus octameric bi-component leukocidin lukgh
6RHW: “Crystal structure of human CD11B I-domain (CD11B-I) in complex with staphylococcus aureus octameric…”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #162743 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RHW
- Type
- protein
- Length
- 711 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0D6HCK9, A0A0D6HC73, P11215
- Ligands
- MG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| G | — | protein | 272 | — | A0A0D6HCK9 |
| H | — | protein | 271 | — | A0A0D6HC73 |
| C | — | protein | 168 | — | P11215 |
Ligands and binding sites
- MG · Magnesium ion · metal · chains H, C
- DMS · Dimethyl sulfoxide · additive · 6 copies · chains G, H, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6RHW · Crystal structure of human CD11b I-domain (CD11b-I) in complex with Staphylococcus aureus… · the same entry in another collection · chain G against G, TM-score 1.00
- P11215 · AlphaFold monomer V2.0 prediction for integrin alpha-M (P11215) · a predicted model of the same protein · chain C against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0D6HCK9
- Every structure of UniProt A0A0D6HC73
- Every structure of UniProt P11215
- Elsewhere: RCSB PDB 6RHW · PDBe 6RHW · UniProt A0A0D6HCK9 · UniProt A0A0D6HC73 · UniProt P11215
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