MolNFT v1 · #162308 · protein
Crystal structure of holo ppep-1(E143A/Y178F) in complex with substrate peptide ac-evnapvp-CONH2
6R50: “Crystal structure of holo ppep-1(E143A/Y178F) in complex with substrate peptide ac-evnapvp-CONH2”. X-ray diffraction, 2 ligands (ACE, ZN). MolNFT v1 #162308 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6R50
- Type
- protein
- Length
- 401 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q183R7
- Ligands
- ACE, ZN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 195 | — | Q183R7 |
| B | — | protein | 192 | — | Q183R7 |
| C, D | — | protein | 7 | — | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · 2 copies · chains B, C, A, D
- ZN · Zinc ion · metal · 2 copies · chains A, D, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6R50 · Crystal structure of holo PPEP-1(E143A/Y178F) in complex with substrate peptide… · the same entry in another collection · chain A against A, TM-score 1.00
- Q183R7 · AlphaFold monomer V2.0 prediction for pro-pro endopeptidase (Q183R7) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q183R7
- Elsewhere: RCSB PDB 6R50 · PDBe 6R50 · UniProt Q183R7
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