MolNFT v1 · #162271 · protein

Structure of the sbp fpvc in complex with NI2+ ion from P. aeruginosa in P212121 space group

6R3Z · Probable adhesion protein: “Structure of the sbp fpvc in complex with NI2+ ion from P. aeruginosa in P212121 space group”. X-ray diffraction, 1 ligand (NI), 1 pocket (best druggability 0.38). MolNFT v1 #162271 on GenesisL1: 3D…

PDB: 6R3Z
Type: protein
Length: 266 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Probable adhesion protein
UniProt: Q9I174
Ligands: NI
Pockets: 1 · best druggability 0.38

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Probable adhesion protein	protein	266	44% helix, 13% strand	Q9I174

Ligands and binding sites

NI · Nickel (II) ion · metal · chains A
EDO · 1,2-ethanediol · additive · 7 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	121	0.38	0.74	16	empty

Compared structures

6R3Z · Structure of the SBP FpvC in complex with Ni2+ ion from P. aeruginosa in P212121 space… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9I174
Elsewhere: RCSB PDB 6R3Z · PDBe 6R3Z · UniProt Q9I174

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