MolNFT v1 · #162093 · protein
4'-phosphopantetheinyl transferase pptab from mycobacterium abscessus at pH 4.6 with MG2+ and CoA.
6QYF · Possible 4'-phosphopantetheinyl transferase: “4'-phosphopantetheinyl transferase pptab from mycobacterium abscessus at pH 4.6 with MG2+ and CoA.”. X-ray diffraction, 2 ligands (COA, MG), 1 pocket (best druggability 0.58). MolNFT v1…
- PDB
- 6QYF
- Type
- protein
- Length
- 218 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Possible 4'-phosphopantetheinyl transferase
- UniProt
- B1MD73
- Ligands
- COA, MG
- Pockets
- 1 · best druggability 0.58
Structure
x-ray diffraction · 1 distinct chain · 31% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Possible 4'-phosphopantetheinyl transferase | protein | 218 | 31% helix, 29% strand | B1MD73 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 287 | 0.58 | 0.77 | 42 | COA, MG |
Compared structures
- 6QYF · 4'-phosphopantetheinyl transferase PptAb from Mycobacterium abscessus at pH 4.6 with Mg2+… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1MD73
- Elsewhere: RCSB PDB 6QYF · PDBe 6QYF · UniProt B1MD73
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