MolNFT v1 · #161988 · protein
Cryoem structure of the human clc-1 chloride channel, membrane domain
6QV6 · Chloride channel protein 1: “Cryoem structure of the human clc-1 chloride channel, membrane domain”. Electron microscopy, 20 pockets (best druggability 0.80). MolNFT v1 #161988 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6QV6
- Type
- protein
- Length
- 938 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chloride channel protein 1
- UniProt
- P35523
- Pockets
- 20 · best druggability 0.80
Structure
electron microscopy · 1 distinct chain · 67% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | Chloride channel protein 1 | protein | 469 | 67% helix, 1% strand | P35523 |
Pockets
20 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 163 | 0.80 | 0.96 | 50 | empty |
| 2 | 59 | 0.73 | 0.98 | 19 | empty |
| 3 | 449 | 0.71 | 0.81 | 54 | empty |
| 4 | 373 | 0.68 | 0.81 | 53 | empty |
| 5 | 319 | 0.66 | 0.81 | 41 | empty |
Interfaces
1 interface between chains.
- B–A · 2408 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 6QV6 · CryoEM structure of the human ClC-1 chloride channel, membrane domain · the same entry in another collection · chain B against B, TM-score 1.00
- P35523 · AlphaFold monomer V2.0 prediction for chloride channel protein 1 (P35523) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35523
- Elsewhere: RCSB PDB 6QV6 · PDBe 6QV6 · UniProt P35523
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