MolNFT v1 · #161983 · protein
Structure of atpgs-bound outward-facing TM287/288 in complex with nanobody NB_TM1
6QV1: “Structure of atpgs-bound outward-facing TM287/288 in complex with nanobody NB_TM1”. X-ray diffraction, 2 ligands (AGS, MG). MolNFT v1 #161983 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6QV1
- Type
- protein
- Length
- 2,514 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9WYC3, Q9WYC4
- Ligands
- AGS, MG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 569 | — | Q9WYC3 |
| B, D | — | protein | 573 | — | Q9WYC4 |
| E, F | — | protein | 115 | — | — |
Ligands and binding sites
- AGS · Phosphothiophosphoric acid-adenylate ester · ligand · 4 copies · chains A, B, C, D
- MG · Magnesium ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6QV1 · Structure of ATPgS-bound outward-facing TM287/288 in complex with nanobody Nb_TM1 · the same entry in another collection · chain C against C, TM-score 1.00
- Q9WYC4 · AlphaFold monomer V2.0 prediction for uncharacterized ABC transporter ATP-binding protein… · a predicted model of the same protein · chain B against A, TM-score 0.71
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WYC3
- Every structure of UniProt Q9WYC4
- Elsewhere: RCSB PDB 6QV1 · PDBe 6QV1 · UniProt Q9WYC3 · UniProt Q9WYC4
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