MolNFT v1 · #161666 · protein
Crystal structure of F181H ubix in complex with prfmn
6QLK · Flavin prenyltransferase ubix: “Crystal structure of F181H ubix in complex with prfmn”. X-ray diffraction, 3 ligands (4LU, NA, PO4). MolNFT v1 #161666 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6QLK
- Type
- protein
- Length
- 206 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavin prenyltransferase ubix
- EC
- 2.5.1.129
- UniProt
- A0A072ZCW8
- Ligands
- 4LU, NA, PO4
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavin prenyltransferase ubix (EC 2.5.1.129) | protein | 206 | 42% helix, 14% strand | A0A072ZCW8 |
Ligands and binding sites
- 4LU · 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol · ligand · chains A
- NA · Sodium ion · metal · chains A
- PO4 · Phosphate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6QLK · Crystal structure of F181H UbiX in complex with prFMN · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A072ZCW8
- Elsewhere: RCSB PDB 6QLK · PDBe 6QLK · UniProt A0A072ZCW8
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