MolNFT v1 · #161603 · protein
Crystal structure of the third PDZ domain of psd-95 protein D332G mutant: space group P21
6QJL · Disks large homolog 4: “Crystal structure of the third PDZ domain of psd-95 protein D332G mutant: space group P21”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #161603 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6QJL
- Type
- protein
- Length
- 194 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Disks large homolog 4
- UniProt
- P78352
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains · 22% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Disks large homolog 4 | protein | 98 | 21% helix, 40% strand | P78352 |
| B | Disks large homolog 4 | protein | 96 | 22% helix, 41% strand | P78352 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 510 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 6QJL · Crystal Structure of the third PDZ domain of PSD-95 protein D332G mutant: space group P21 · the same entry in another collection · chain A against A, TM-score 1.00
- P78352 · AlphaFold monomer V2.0 prediction for disks large homolog 4 (P78352) · a predicted model of the same protein · chain B against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P78352
- Elsewhere: RCSB PDB 6QJL · PDBe 6QJL · UniProt P78352
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