MolNFT v1 · #160679 · protein
Sbp rafe in complex with verbascose
6PRE: “Sbp rafe in complex with verbascose”. X-ray diffraction, 3 ligands (GLA, GLC, FRU). MolNFT v1 #160679 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PRE
- Type
- protein
- Length
- 1,540 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0E8ZWG6
- Ligands
- GLA, GLC, FRU
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 386 | — | A0A0E8ZWG6 |
| B, D | — | protein | 384 | — | A0A0E8ZWG6 |
Ligands and binding sites
- GLA · alpha-D-galactopyranose · sugar · 12 copies · chains A, B, C, D
- GLC · alpha-D-glucopyranose · sugar · 4 copies · chains A, B, C, D
- FRU · beta-D-fructofuranose · sugar · 4 copies · chains A, B, C, D
- EDO · 1,2-ethanediol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PRE · SBP RafE in complex with verbascose · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0E8ZWG6
- Elsewhere: RCSB PDB 6PRE · PDBe 6PRE · UniProt A0A0E8ZWG6
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