MolNFT v1 · #160507 · protein
Trk-a in complex with ligand
6PME: “Trk-a in complex with ligand”. X-ray diffraction, 3 ligands (OOY, SRT, ZN). MolNFT v1 #160507 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PME
- Type
- protein
- Length
- 813 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P04629
- Ligands
- OOY, SRT, ZN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 268 | — | P04629 |
| B | — | protein | 271 | — | P04629 |
| C | — | protein | 274 | — | P04629 |
Ligands and binding sites
- OOY · N-[2,4-bis(morpholin-4-yl)phenyl]-3-phenoxybenzamide · ligand · 3 copies · chains A, B, C
- SRT · S,R meso-tartaric acid · ligand · 2 copies · chains A, B
- ZN · Zinc ion · metal · 3 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PME · Trk-a in complex with ligand · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04629
- Elsewhere: RCSB PDB 6PME · PDBe 6PME · UniProt P04629
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