MolNFT v1 · #160488 · protein
Cryoem structure of zebra fish alpha-1 glycine receptor bound with GABA in nanodisc, closed state
6PLV: “Cryoem structure of zebra fish alpha-1 glycine receptor bound with GABA in nanodisc, closed state”. Electron microscopy, 3 ligands (UNL, ABU, NAG). MolNFT v1 #160488 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PLV
- Type
- protein
- Length
- 1,725 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O93430
- Ligands
- UNL, ABU, NAG
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E | — | protein | 345 | — | O93430 |
Ligands and binding sites
- UNL · Unknown ligand · ligand · 60 copies · chains A, B, C, D, E
- ABU · Gamma-amino-butanoic acid · ligand · 5 copies · chains A, B, C, D, E
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 10 copies · chains A, B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PLV · CryoEM structure of zebra fish alpha-1 glycine receptor bound with GABA in nanodisc… · the same entry in another collection · chain E against E, TM-score 1.00
- O93430 · AlphaFold monomer V2.0 prediction for glycine receptor subunit ALPHAZ1 (O93430) · a predicted model of the same protein · chain B against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O93430
- Elsewhere: RCSB PDB 6PLV · PDBe 6PLV · UniProt O93430
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