MolNFT v1 · #160486 · protein
Cryoem structure of zebra fish alpha-1 glycine receptor bound with taurine in nanodisc, closed state
6PLT: “Cryoem structure of zebra fish alpha-1 glycine receptor bound with taurine in nanodisc, closed state”. Electron microscopy, 3 ligands (UNL, TAU, NAG). MolNFT v1 #160486 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PLT
- Type
- protein
- Length
- 1,725 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O93430
- Ligands
- UNL, TAU, NAG
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E, D, C, B | — | protein | 345 | — | O93430 |
Ligands and binding sites
- UNL · Unknown ligand · ligand · 45 copies · chains A, E, D, C, B
- TAU · 2-aminoethanesulfonic acid · ligand · 5 copies · chains A, B, E, D, C
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 10 copies · chains A, E, D, C, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PLT · CryoEM structure of zebra fish alpha-1 glycine receptor bound with taurine in nanodisc… · the same entry in another collection · chain B against B, TM-score 1.00
- O93430 · AlphaFold monomer V2.0 prediction for glycine receptor subunit ALPHAZ1 (O93430) · a predicted model of the same protein · chain C against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O93430
- Elsewhere: RCSB PDB 6PLT · PDBe 6PLT · UniProt O93430
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