MolNFT v1 · #160422 · protein
Crystal structure of oxa-48 with hydrolyzed imipenem
6PK0: “Crystal structure of oxa-48 with hydrolyzed imipenem”. X-ray diffraction, 2 ligands (HIW, CL). MolNFT v1 #160422 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PK0
- Type
- protein
- Length
- 975 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A482LRD5
- Ligands
- HIW, CL
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 244 | — | A0A482LRD5 |
| B, C | — | protein | 243 | — | A0A482LRD5 |
| D | — | protein | 245 | — | A0A482LRD5 |
Ligands and binding sites
- HIW · (2R,4S)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-4-[(2-{[(Z)-iminomethyl]amino}ethyl)sulfanyl]-3,4-dihydro-2H-pyrrole-5-carboxylic acid · ligand · 5 copies · chains A, C, B, D
- CL · Chloride ion · ion · 2 copies · chains A, B, C, D
- GOL · Glycerol · additive · 6 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PK0 · Crystal Structure of OXA-48 with Hydrolyzed Imipenem · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A482LRD5
- Elsewhere: RCSB PDB 6PK0 · PDBe 6PK0 · UniProt A0A482LRD5
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