MolNFT v1 · #160401 · protein
HIV-1 protease NL4-3 wt in complex with lopinavir
6PJB: “HIV-1 protease NL4-3 wt in complex with lopinavir”. X-ray diffraction, 2 ligands (AB1, SO4). MolNFT v1 #160401 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PJB
- Type
- protein
- Length
- 198 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8ULI9
- Ligands
- AB1, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | — | protein | 99 | — | Q8ULI9 |
Ligands and binding sites
- AB1 · N-{1-benzyl-4-[2-(2,6-dimethyl-phenoxy)-acetylamino]-3-hydroxy-5-phenyl-pentyl}-3-methyl-2-(2-oxo-tetrahydro-pyrimidin-1-yl)-butyramide · ligand · chains B, A
- SO4 · Sulfate ion · ion · 8 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PJB · HIV-1 Protease NL4-3 WT in Complex with Lopinavir · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ULI9
- Elsewhere: RCSB PDB 6PJB · PDBe 6PJB · UniProt Q8ULI9
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