MolNFT v1 · #160347 · protein
Crystal structure of marinobacter subterrani acetylpolyamine amidohydrolase (msapah) complexed with 5-[(3-aminopropyl) AMINO]PENTANE-1-thiol
6PHR: “Crystal structure of marinobacter subterrani acetylpolyamine amidohydrolase (msapah) complexed with…”. X-ray diffraction, 4 ligands (SS9, K, ZN). MolNFT v1 #160347 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PHR
- Type
- protein
- Length
- 693 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0J7JFD7
- Ligands
- SS9, K, ZN, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 346 | — | A0A0J7JFD7 |
| B | — | protein | 347 | — | A0A0J7JFD7 |
Ligands and binding sites
- SS9 · 5-[(3-aminopropyl)amino]pentane-1-thiol · ligand · 2 copies · chains A, B
- K · Potassium ion · metal · 4 copies · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PHR · Crystal structure of Marinobacter subterrani acetylpolyamine amidohydrolase (msAPAH)… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0J7JFD7
- Elsewhere: RCSB PDB 6PHR · PDBe 6PHR · UniProt A0A0J7JFD7
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