MolNFT v1 · #160202 · protein

The structure of SMLT3025, an immunity protein of the stenotrophomonas maltophilia type IV secretion system

6PDK · Uncharacterized protein: “The structure of SMLT3025, an immunity protein of the stenotrophomonas maltophilia type IV secretion system”. X-ray diffraction, 2 ligands (BR, CL), 2 pockets (best druggability 0.40). MolNFT v1 #160202 on…

PDB: 6PDK
Type: protein
Length: 248 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein
UniProt: B2FJJ6
Ligands: BR, CL
Pockets: 2 · best druggability 0.40

Structure

x-ray diffraction · 1 distinct chain · 24% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein	protein	248	24% helix, 34% strand	B2FJJ6

Ligands and binding sites

BR · Bromide ion · ion · 11 copies · chains A
CL · Chloride ion · ion · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	124	0.40	0.75	25	BR
2	54	0.28	0.75	18	BR

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

6PDK · The Structure of Smlt3025, an immunity protein of the Stenotrophomonas maltophilia type… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B2FJJ6
Elsewhere: RCSB PDB 6PDK · PDBe 6PDK · UniProt B2FJJ6

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