MolNFT v1 · #160168 · protein
Crystal structure of human diphosphoinositol polyphosphate phosphohydrolase 1 in complex with 5-IP7
6PCL: “Crystal structure of human diphosphoinositol polyphosphate phosphohydrolase 1 in complex with 5-IP7”. X-ray diffraction, 3 ligands (I7P, MG, CL). MolNFT v1 #160168 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PCL
- Type
- protein
- Length
- 135 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O95989
- Ligands
- I7P, MG, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 135 | — | O95989 |
Ligands and binding sites
- I7P · (1R,2R,3S,4S,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy) cyclohexyl trihydrogen diphosphate · ligand · chains A
- MG · Magnesium ion · metal · 3 copies · chains A
- CL · Chloride ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PCL · Crystal structure of human diphosphoinositol polyphosphate phosphohydrolase 1 in complex… · the same entry in another collection · chain A against A, TM-score 1.00
- O95989 · AlphaFold monomer V2.0 prediction for diphosphoinositol polyphosphate phosphohydrolase 1… · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O95989
- Elsewhere: RCSB PDB 6PCL · PDBe 6PCL · UniProt O95989
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