MolNFT v1 · #159902 · protein
Salmonella typhi pltb homopentamer N29K mutant with NEU5AC-alpha-2-3- gal-beta-1-4-glcnac glycans
6P4Q: “Salmonella typhi pltb homopentamer N29K mutant with NEU5AC-alpha-2-3- gal-beta-1-4-glcnac glycans”. X-ray diffraction, 3 ligands (NAG, GAL, SIA). MolNFT v1 #159902 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6P4Q
- Type
- protein
- Length
- 571 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8Z6A3
- Ligands
- NAG, GAL, SIA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, D, E | — | protein | 114 | — | Q8Z6A3 |
| B | — | protein | 115 | — | Q8Z6A3 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 6 copies · chains C
- GAL · beta-D-galactopyranose · sugar · 6 copies · chains A, B, C, D, E
- SIA · N-acetyl-alpha-neuraminic acid · sugar · 6 copies · chains A, B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6P4Q · Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc… · the same entry in another collection · chain E against E, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Z6A3
- Elsewhere: RCSB PDB 6P4Q · PDBe 6P4Q · UniProt Q8Z6A3
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