MolNFT v1 · #159671 · protein
First bromo-adjacent homology (bah) domain of human polybromo-1 (PBRM1)
6OXB: “First bromo-adjacent homology (bah) domain of human polybromo-1 (PBRM1)”. X-ray diffraction, 2 ligands (SO4, CL). MolNFT v1 #159671 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6OXB
- Type
- protein
- Length
- 947 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q86U86
- Ligands
- SO4, CL
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A, F | — | protein | 158 | — | Q86U86 |
| C | — | protein | 159 | — | Q86U86 |
| D | — | protein | 157 | — | Q86U86 |
| E | — | protein | 157 | — | Q86U86 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 30 copies · chains B, A, C, F, D, E
- CL · Chloride ion · ion · 2 copies · chains B, A, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6OXB · First bromo-adjacent homology (BAH) domain of human Polybromo-1 (PBRM1) · the same entry in another collection · chain F against F, TM-score 1.00
- Q86U86 · AlphaFold monomer V2.0 prediction for protein polybromo-1 (Q86U86) · a predicted model of the same protein · chain E against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q86U86
- Elsewhere: RCSB PDB 6OXB · PDBe 6OXB · UniProt Q86U86
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