MolNFT v1 · #159479 · protein

Crystal structure of the MSH6 pwwp domain

6OQM · DNA mismatch repair protein MSH6: “Crystal structure of the MSH6 pwwp domain”. X-ray diffraction, 3 ligands (MG, UNX, SO4). MolNFT v1 #159479 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6OQM
Type: protein
Length: 100 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA mismatch repair protein MSH6
UniProt: P52701
Ligands: MG, UNX, SO4

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA mismatch repair protein MSH6	protein	100	20% helix, 28% strand	P52701

Ligands and binding sites

MG · Magnesium ion · metal · chains A
UNX · Unknown atom or ion · ion · 4 copies · chains A
SO4 · Sulfate ion · ion · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6OQM · crystal structure of the MSH6 PWWP domain · the same entry in another collection · chain A against A, TM-score 1.00
P52701 · AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH6 (P52701) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P52701
Elsewhere: RCSB PDB 6OQM · PDBe 6OQM · UniProt P52701

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