MolNFT v1 · #159367 · protein
Crystal structure of desulfovibrio vulgaris carbon monoxide dehydrogenase produced without cooc, as-isolated
6ONC: “Crystal structure of desulfovibrio vulgaris carbon monoxide dehydrogenase produced without cooc, as-isolated”. X-ray diffraction, 6 ligands (SF4, XCC, FES). MolNFT v1 #159367 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6ONC
- Type
- protein
- Length
- 2,503 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q72A99
- Ligands
- SF4, XCC, FES, MG, FE, CL
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 625 | — | Q72A99 |
| B, C | — | protein | 626 | — | Q72A99 |
| D | — | protein | 626 | — | Q72A99 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · 4 copies · chains A, B, C, D
- XCC · FE(4)-NI(1)-S(4) cluster · ligand · 4 copies · chains A, B, C, D
- FES · Fe2/s2 (inorganic) cluster · ligand · 2 copies · chains A, B, C, D
- MG · Magnesium ion · metal · 8 copies · chains B, D
- FE · Fe (III) ion · metal · 4 copies · chains A, B, C, D
- CL · Chloride ion · ion · 2 copies · chains B, C
- GOL · Glycerol · additive · 3 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q72A99
- Elsewhere: RCSB PDB 6ONC · PDBe 6ONC · UniProt Q72A99
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