MolNFT v1 · #159151 · protein
Crystal structure of arachidonic acid bound to V349I murine COX-2
6OFY: “Crystal structure of arachidonic acid bound to V349I murine COX-2”. X-ray diffraction, 4 ligands (COH, ACD, AKR). MolNFT v1 #159151 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6OFY
- Type
- protein
- Length
- 1,103 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q05769
- Ligands
- COH, ACD, AKR, NAG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 551 | — | Q05769 |
| B | — | protein | 552 | — | Q05769 |
Ligands and binding sites
- COH · Protoporphyrin IX containing co · ligand · 2 copies · chains A, B
- ACD · Arachidonic acid · ligand · 2 copies · chains A, B
- AKR · Acrylic acid · ligand · chains A
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 8 copies · chains A, B
- BOG · octyl beta-D-glucopyranoside · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6OFY · Crystal Structure of Arachidonic Acid bound to V349I murine COX-2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q05769
- Elsewhere: RCSB PDB 6OFY · PDBe 6OFY · UniProt Q05769
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