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MolNFT v1 · #158971 · protein

2.05 ångström resolution crystal structure of aminopeptidase B from escherichia COLI str. K-12 substr. MG1655.

6OAD: “2.05 ångström resolution crystal structure of aminopeptidase B from escherichia COLI str. K-12 substr. MG1655.”. X-ray diffraction, 4 ligands (BCT, ZN, CA). MolNFT v1 #158971 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
6OAD
Type
protein
Length
5,109 residues
Chains
12
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
A0A387CSU7
Ligands
BCT, ZN, CA, CL

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, E, F, G, H, J, K—protein426—A0A387CSU7
D, I, L—protein425—A0A387CSU7

Ligands and binding sites

  • BCT · Bicarbonate ion · ligand · 19 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
  • ZN · Zinc ion · metal · 24 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
  • CA · Calcium ion · metal · 13 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
  • CL · Chloride ion · ion · 9 copies · chains A, B, C, E, F, K, L
  • EDO · 1,2-ethanediol · additive · 39 copies · chains A, B, C, D, E, F, G, I, H, J, K, L
  • PEG · Di(hydroxyethyl)ether · additive · 5 copies · chains C, D, E, L
  • PGE · Triethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6OAD · 2.05 Angstrom Resolution Crystal Structure of Aminopeptidase B from Escherichia coli str.… · the same entry in another collection · chain A against A, TM-score 1.00

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