MolNFT v1 · #158971 · protein
2.05 ångström resolution crystal structure of aminopeptidase B from escherichia COLI str. K-12 substr. MG1655.
6OAD: “2.05 ångström resolution crystal structure of aminopeptidase B from escherichia COLI str. K-12 substr. MG1655.”. X-ray diffraction, 4 ligands (BCT, ZN, CA). MolNFT v1 #158971 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6OAD
- Type
- protein
- Length
- 5,109 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A387CSU7
- Ligands
- BCT, ZN, CA, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, E, F, G, H, J, K | — | protein | 426 | — | A0A387CSU7 |
| D, I, L | — | protein | 425 | — | A0A387CSU7 |
Ligands and binding sites
- BCT · Bicarbonate ion · ligand · 19 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
- ZN · Zinc ion · metal · 24 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
- CA · Calcium ion · metal · 13 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
- CL · Chloride ion · ion · 9 copies · chains A, B, C, E, F, K, L
- EDO · 1,2-ethanediol · additive · 39 copies · chains A, B, C, D, E, F, G, I, H, J, K, L
- PEG · Di(hydroxyethyl)ether · additive · 5 copies · chains C, D, E, L
- PGE · Triethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6OAD · 2.05 Angstrom Resolution Crystal Structure of Aminopeptidase B from Escherichia coli str.… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A387CSU7
- Elsewhere: RCSB PDB 6OAD · PDBe 6OAD · UniProt A0A387CSU7
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