MolNFT v1 · #158601 · protein
NMR solution structure of BCD1P120-303 from saccharomyces cerevisiae
6NZ2 · Box C/D snorna protein 1: “NMR solution structure of BCD1P120-303 from saccharomyces cerevisiae”. Solution nmr, 2 pockets (best druggability 0.47). MolNFT v1 #158601 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NZ2
- Type
- protein
- Length
- 188 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Box C/D snorna protein 1
- UniProt
- P38772
- Pockets
- 2 · best druggability 0.47
Structure
solution nmr · 1 distinct chain · 20% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Box C/D snorna protein 1 | protein | 188 | 20% helix, 26% strand | P38772 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 98 | 0.47 | 0.80 | 18 | empty |
| 2 | 79 | 0.41 | 0.79 | 18 | empty |
Compared structures
- 6NZ2 · NMR solution structure of Bcd1p120-303 from Saccharomyces cerevisiae · the same entry in another collection · chain A against A, TM-score 1.00
- P38772 · AlphaFold monomer V2.0 prediction for box C/D snorna protein 1 (P38772) · a predicted model of the same protein · chain A against A, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38772
- Elsewhere: RCSB PDB 6NZ2 · PDBe 6NZ2 · UniProt P38772
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