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NMR solution structure of BCD1P120-303 from saccharomyces cerevisiae

Analyse NMR solution structure of BCD1P120-303 from saccharomyces cerevisiae in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6NZ2
Type: protein
Length: 188 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Box C/D snorna protein 1
UniProt: P38772
Pockets: 2 · best druggability 0.47

Structure

solution nmr · 1 distinct chain · 20% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Box C/D snorna protein 1	protein	188	20% helix, 26% strand	P38772

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	98	0.47	0.80	18	empty
2	79	0.41	0.79	18	empty

Compared structures

6NZ2 · NMR solution structure of Bcd1p120-303 from Saccharomyces cerevisiae · the same entry in another collection · chain A against A, TM-score 1.00
P38772 · AlphaFold monomer V2.0 prediction for box C/D snorna protein 1 (P38772) · a predicted model of the same protein · chain A against A, TM-score 0.87

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P38772
Elsewhere: RCSB PDB 6NZ2 · PDBe 6NZ2 · UniProt P38772

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