MolNFT v1 · #158598 · protein
Human M-aaa protease AFG3L2, substrate-bound
6NYY: “Human M-aaa protease AFG3L2, substrate-bound”. Electron microscopy, 4 ligands (ANP, ADP, ZN). MolNFT v1 #158598 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NYY
- Type
- protein
- Length
- 2,894 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9Y4W6
- Ligands
- ANP, ADP, ZN, MG
Structure
electron microscopy · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 459 | — | Q9Y4W6 |
| B | — | protein | 487 | — | Q9Y4W6 |
| C, D | — | protein | 491 | — | Q9Y4W6 |
| E | — | protein | 467 | — | Q9Y4W6 |
| F | — | protein | 460 | — | Q9Y4W6 |
| G, H | — | protein | 11 | — | — |
| I | — | protein | 9 | — | — |
| J | — | protein | 8 | — | — |
Ligands and binding sites
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 3 copies · chains B, C, D, E
- ADP · Adenosine-5'-diphosphate · ligand · chains E
- ZN · Zinc ion · metal · 6 copies · chains A, B, H, C, I, D, J, E, F
- MG · Magnesium ion · metal · 3 copies · chains B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y4W6
- Elsewhere: RCSB PDB 6NYY · PDBe 6NYY · UniProt Q9Y4W6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.