MolNFT v1 · #158394 · protein
Cryoem structure of helicobacter pylori urea channel in open state.
6NSK: “Cryoem structure of helicobacter pylori urea channel in open state.”. Electron microscopy, 1 ligand (XP4). MolNFT v1 #158394 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NSK
- Type
- protein
- Length
- 1,092 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P56874
- Ligands
- XP4
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F | — | protein | 182 | — | P56874 |
Ligands and binding sites
- XP4 · 1,2-dimyristoyl-sn-glycero-3-phosphate · ligand · 18 copies · chains A, B, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NSK · CryoEM structure of Helicobacter pylori urea channel in open state. · the same entry in another collection · chain C against C, TM-score 1.00
- P56874 · AlphaFold monomer V2.0 prediction for acid-activated urea channel (P56874) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56874
- Elsewhere: RCSB PDB 6NSK · PDBe 6NSK · UniProt P56874
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