MolNFT v1 · #158102 · protein

EPHA2 lbd in complex with ba-wla-yrpkbio peptide

6NK1: “EPHA2 lbd in complex with ba-wla-yrpkbio peptide”. X-ray diffraction. MolNFT v1 #158102 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6NK1
Type: protein
Length: 383 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P29317

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	181	—	P29317
B	—	protein	174	—	P29317
C, D	—	protein	14	—	—

Ligands and binding sites

ACT · Acetate ion · additive · 2 copies · chains B
GOL · Glycerol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6NK1 · EphA2 LBD in complex with bA-WLA-YRPKbio peptide · the same entry in another collection · chain A against A, TM-score 1.00
P29317 · AlphaFold monomer V2.0 prediction for ephrin type-a receptor 2 (P29317) · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P29317
Elsewhere: RCSB PDB 6NK1 · PDBe 6NK1 · UniProt P29317

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