MolNFT v1 · #157960 · protein
Potyvirus viral protein genome linked (vpg) emulates the M7G cap to recruit the eukaryotic translation initiation factor EIF4E
6NFW: “Potyvirus viral protein genome linked (vpg) emulates the M7G cap to recruit the eukaryotic translation…”. Solution nmr, 3 pockets (best druggability 0.44). MolNFT v1 #157960 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6NFW
- Type
- protein
- Length
- 151 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Vpg
- UniProt
- A6YPB3
- Pockets
- 3 · best druggability 0.44
Structure
solution nmr · 1 distinct chain · 12% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vpg | protein | 151 | 12% helix, 16% strand | A6YPB3 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 117 | 0.44 | 0.77 | 22 | empty |
| 2 | 95 | 0.34 | 0.73 | 14 | empty |
| 3 | 54 | 0.34 | 0.78 | 16 | empty |
Compared structures
- 6NFW · Potyvirus viral protein genome linked (VPg) emulates the m7G cap to recruit the… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6YPB3
- Elsewhere: RCSB PDB 6NFW · PDBe 6NFW · UniProt A6YPB3
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